Heatmap: Cluster_140 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Light: 268 uE m-2 s-1	Light: 202.5 uE m-2 s-1 (Control)	Light: 135 uE m-2 s-1	Light: 67.5 uE m-2 s-1	Photoperiod: L24	Photoperiod: L20D4 (Control)	Photoperiod: L12D12	Photoperiod: L8D16	RBW: 4:1:1 (Control)	RBW: 4:1:0	RBW: 3:1:1	RBW: 3:1:0	Nitrogen: 0%	Nitrogen: 25%	Nitrogen: 50%	Nitrogen: 100% (Control)	Nitrogen: 150%	Phosphorous: 0%	Phosphorous: 25%	Phosphorous: 50%	Phosphorous: 100% (Control)	Phosphorous: 150%	Potassium: 0%	Potassium: 25%	Potassium: 50%	Potassium: 100% (Control)	Potassium: 150%	Temperature: 20°C	Temperature: 25°C (Control)	Temperature: 30°C	Temperature: 35°C
Lsat_1_v5_gn_0_41600.1 (RPOA)	0.65	0.01	0.22	0.81	-0.36	-1.12	0.16	0.33	0.1	-0.15	0.48	0.03	0.19	-1.38	-1.94	-0.02	0.21	1.64	-0.63	0.05	-0.08	-0.03	-2.1	-0.68	-0.21	0.09	0.04	0.28	-0.5	-1.0	-0.73
Lsat_1_v5_gn_1_116300.1 (RPS8)	0.35	-0.48	0.35	0.55	-0.91	-0.79	0.26	-0.03	0.31	0.55	0.02	0.25	0.59	-1.98	-1.59	0.2	0.22	1.33	-0.5	0.23	0.27	-0.22	-2.34	0.33	0.06	0.05	-0.19	0.58	-1.39	-1.33	-0.89
Lsat_1_v5_gn_1_38660.1 (ATPH)	0.28	0.47	0.39	0.57	-0.26	-0.37	0.4	0.24	0.13	0.19	-0.27	-0.52	-0.49	-1.17	-0.32	0.1	0.18	1.27	0.02	-0.09	0.6	0.06	-4.12	-0.18	-0.06	-0.25	0.07	-0.11	-0.3	-0.46	-1.32
Lsat_1_v5_gn_1_38680.1 (ATPF)	0.3	0.49	0.72	0.8	-0.47	-0.5	0.4	0.03	0.02	0.14	-0.36	-0.29	-0.61	-1.5	-0.64	-0.07	0.13	1.29	0.04	0.37	0.5	0.12	-3.69	-0.32	-0.1	-0.27	0.02	-0.04	-0.48	-0.42	-1.18
Lsat_1_v5_gn_1_88180.1 (RAF36)	-0.72	-0.51	-0.44	0.52	-2.64	-2.51	0.1	-0.95	0.97	1.01	0.1	0.78	1.37	-2.61	-1.82	0.16	0.57	2.13	-1.82	0.08	0.35	-0.53	-4.0	0.17	-0.56	-0.48	-0.56	-0.04	-1.39	-1.03	-1.25
Lsat_1_v5_gn_1_96161.1 (RPOC1)	-0.34	-1.3	0.3	1.84	-2.62	-3.77	-1.76	-1.31	0.3	-2.61	-0.37	-0.44	1.32	-0.74	-2.36	0.82	-0.19	2.51	-1.34	-4.83	-0.65	-0.51	-0.46	-0.13	-0.65	0.6	0.11	0.21	-0.1	-3.95	-0.54
Lsat_1_v5_gn_2_20541.1 (ET1)	0.32	0.23	0.48	1.27	-2.46	-2.58	-0.66	-1.3	0.76	0.55	0.08	0.4	0.7	-1.81	-1.42	-0.2	0.07	1.18	-1.18	0.41	0.41	0.02	-4.18	0.52	0.19	-0.07	0.01	0.29	-1.22	-1.19	-0.79
Lsat_1_v5_gn_2_20580.1 (AUXILIN-LIKE4)	-0.2	0.49	0.56	1.68	-2.7	-3.55	0.36	-0.75	0.07	0.24	-0.55	0.11	0.39	-2.55	-2.48	-0.32	-0.27	2.14	-1.65	-0.25	0.11	0.08	-1.7	0.28	-0.1	-0.28	-0.05	0.28	-1.27	-0.87	-0.9
Lsat_1_v5_gn_2_20620.1 (RPS12)	0.12	0.25	-0.01	0.22	-0.23	-0.31	0.13	0.25	0.31	0.06	0.12	-0.12	-0.04	-0.57	-0.14	0.01	0.12	0.99	-0.21	0.21	-0.08	0.15	-1.88	-0.0	-0.3	0.09	0.34	-0.28	-0.25	-0.31	-0.43
Lsat_1_v5_gn_2_92060.1 (RPL14)	0.43	0.02	0.18	0.77	-0.97	-1.12	-0.07	0.09	0.38	0.41	0.35	0.28	0.57	-2.05	-2.31	-0.51	0.19	1.53	-0.45	0.39	0.09	0.11	-2.94	0.29	-0.14	-0.15	0.05	0.1	-0.83	-0.76	-1.2
Lsat_1_v5_gn_2_97121.1 (RAF36)	-0.72	-0.51	-0.44	0.52	-2.64	-2.51	0.1	-0.95	0.97	1.01	0.1	0.78	1.37	-2.61	-1.82	0.16	0.57	2.13	-1.82	0.08	0.35	-0.53	-4.0	0.17	-0.56	-0.48	-0.56	-0.04	-1.39	-1.03	-1.25
Lsat_1_v5_gn_2_98441.1 (ICL)	0.06	0.04	0.36	1.08	-2.8	-2.75	-0.91	-1.53	0.75	0.77	0.35	0.53	0.8	-1.9	-1.68	-0.26	0.33	1.68	-1.37	0.41	0.46	0.15	-3.55	0.24	0.12	-0.26	-0.26	0.17	-1.19	-1.36	-1.12
Lsat_1_v5_gn_3_110420.1 (ET1)	0.32	0.23	0.48	1.27	-2.46	-2.58	-0.66	-1.3	0.76	0.55	0.08	0.4	0.7	-1.81	-1.42	-0.2	0.07	1.18	-1.18	0.41	0.41	0.02	-4.18	0.52	0.19	-0.07	0.01	0.29	-1.22	-1.19	-0.79
Lsat_1_v5_gn_3_22620.1 (RPS3)	-0.25	0.03	0.91	0.81	-1.17	-1.43	0.09	-0.15	0.19	0.23	-0.3	0.37	0.44	-1.71	-1.74	0.09	0.26	1.88	-0.4	0.18	0.08	-0.35	-2.86	0.08	-0.15	-0.2	-0.11	0.11	-0.84	-0.86	-0.77
Lsat_1_v5_gn_3_81720.1 (RPS11)	0.16	0.14	0.64	0.62	-0.94	-0.46	0.77	-0.07	0.38	0.25	0.01	0.3	0.78	-2.4	-1.23	-0.13	0.2	1.44	-0.46	0.18	-0.72	-0.54	-2.86	-0.54	-0.1	-0.24	-0.02	0.45	-0.86	-0.75	-0.53
Lsat_1_v5_gn_3_85700.1 (RPOA)	-0.05	0.06	0.96	0.45	-0.65	-1.24	-0.66	-0.97	0.28	0.56	0.4	0.57	0.58	-0.91	-2.47	0.1	0.17	1.83	-0.29	-0.19	-0.17	-0.69	-2.65	0.28	-0.04	-0.14	0.03	0.27	-1.13	-1.33	-1.07
Lsat_1_v5_gn_3_85721.1 (PETB)	0.68	0.59	1.04	1.18	-0.65	-0.64	0.4	-0.01	0.02	0.02	-0.32	-0.53	-0.62	-1.53	-0.98	-0.44	-0.17	1.54	-0.19	0.26	0.17	0.12	-2.78	-0.33	-0.2	-0.03	-0.12	0.01	-0.6	-1.23	-1.63
Lsat_1_v5_gn_3_9760.1 (DIR6)	-0.83	-0.79	-0.03	0.76	-0.88	-0.73	0.04	0.11	-0.08	-0.06	-0.06	0.13	0.51	-2.08	-0.69	0.02	0.31	1.74	-0.62	0.29	-0.37	-0.22	-1.65	0.17	0.02	0.23	-0.07	-0.21	-0.42	0.31	0.21
Lsat_1_v5_gn_3_99201.1 (RPS4)	0.3	-0.99	0.64	0.61	-0.28	-0.74	0.36	-1.24	0.85	0.04	0.14	0.26	0.27	-2.81	-1.15	0.43	-0.09	1.55	-0.39	0.34	0.04	-0.41	-1.55	-0.07	-0.28	-0.32	-0.34	0.31	-0.28	-0.84	-0.41
Lsat_1_v5_gn_4_147680.1 (RH30)	0.15	0.22	0.62	1.53	-0.98	-1.99	0.24	-1.12	0.75	0.22	0.15	0.44	1.03	-2.99	-1.19	-0.11	0.41	0.84	-0.92	0.35	0.23	0.05	-4.33	0.21	-0.44	-0.41	-0.08	0.03	-1.63	-0.95	-1.34
Lsat_1_v5_gn_4_147820.1 (ET1)	0.32	0.23	0.48	1.27	-2.46	-2.58	-0.66	-1.3	0.76	0.55	0.08	0.4	0.7	-1.81	-1.42	-0.2	0.07	1.18	-1.18	0.41	0.41	0.02	-4.18	0.52	0.19	-0.07	0.01	0.29	-1.22	-1.19	-0.79
Lsat_1_v5_gn_4_147840.1 (PSAL)	0.38	0.18	0.66	1.46	-2.39	-2.4	-0.84	-1.09	0.49	0.57	0.15	0.27	0.81	-2.55	-1.23	-0.39	0.27	0.97	-0.98	0.18	0.47	0.18	-3.36	0.7	0.17	-0.37	-0.73	0.35	-0.99	-0.85	-0.64
Lsat_1_v5_gn_4_53460.1 (PUB29)	0.38	-0.09	1.7	1.81	-2.38	-4.38	-1.6	-2.13	-0.44	0.93	-0.24	0.94	1.15	-2.94	-2.56	0.09	0.42	-0.13	-1.78	-0.29	-0.76	-1.22	-0.16	-0.82	-0.27	-0.47	-2.17	-0.24	-2.35	0.39	1.18
Lsat_1_v5_gn_5_144720.1 (RPL14)	0.38	-0.07	0.08	0.94	-0.86	-1.03	0.12	0.27	0.7	0.45	-0.08	0.25	0.53	-1.16	-3.32	0.02	0.78	1.18	-0.94	0.1	-0.2	-0.31	-2.12	0.08	-0.54	0.21	-0.17	0.21	-0.9	-0.46	-0.74
Lsat_1_v5_gn_5_162761.1 (XF1)	0.46	-0.12	1.82	1.71	-1.37	-2.24	-1.56	-1.54	-0.47	-0.19	-0.65	0.36	1.35	-1.53	-1.61	0.59	0.72	-1.27	-2.11	-0.74	-0.3	-0.35	-2.11	-0.51	-0.07	0.32	-0.11	0.08	-0.68	-0.07	0.22
Lsat_1_v5_gn_5_181860.1 (ET1)	0.32	0.23	0.48	1.27	-2.46	-2.58	-0.66	-1.3	0.76	0.55	0.08	0.4	0.7	-1.81	-1.42	-0.2	0.07	1.18	-1.18	0.41	0.41	0.02	-4.18	0.52	0.19	-0.07	0.01	0.29	-1.22	-1.19	-0.79
Lsat_1_v5_gn_5_36201.1 (ETR2)	-0.22	0.38	0.65	1.32	-1.7	-1.36	0.37	-0.52	0.56	0.42	0.05	-0.1	0.32	-1.79	-0.76	0.09	0.4	2.43	-2.55	-0.36	-0.21	-0.62	-3.4	-0.28	-0.45	-0.9	-0.57	-0.2	-1.2	-1.2	-1.5
Lsat_1_v5_gn_5_44680.1 (RPL33)	0.68	0.43	0.3	0.68	-1.13	-0.9	-0.32	-0.44	0.53	0.03	0.25	0.32	-0.04	-1.71	-1.87	-0.31	-0.44	1.45	-0.11	0.23	0.34	-0.02	-3.65	0.06	0.14	0.03	0.38	0.58	-0.86	-0.46	-1.71
Lsat_1_v5_gn_5_50360.1 (PETB)	0.68	0.59	1.04	1.18	-0.65	-0.64	0.4	-0.01	0.02	0.02	-0.32	-0.53	-0.62	-1.53	-0.98	-0.44	-0.17	1.54	-0.19	0.26	0.17	0.12	-2.78	-0.33	-0.2	-0.03	-0.12	0.01	-0.6	-1.23	-1.63
Lsat_1_v5_gn_5_50441.1 (RPL14)	0.43	0.02	0.18	0.77	-0.97	-1.12	-0.07	0.09	0.38	0.41	0.35	0.28	0.57	-2.05	-2.31	-0.51	0.19	1.53	-0.45	0.39	0.09	0.11	-2.94	0.29	-0.14	-0.15	0.05	0.1	-0.83	-0.76	-1.2
Lsat_1_v5_gn_5_61480.1 (RPL14)	0.43	0.02	0.18	0.77	-0.97	-1.12	-0.07	0.09	0.38	0.41	0.35	0.28	0.57	-2.05	-2.31	-0.51	0.19	1.53	-0.45	0.39	0.09	0.11	-2.94	0.29	-0.14	-0.15	0.05	0.1	-0.83	-0.76	-1.2
Lsat_1_v5_gn_5_67060.1 (PSBH)	0.58	0.8	1.11	1.12	-0.58	-0.92	0.23	-0.13	0.03	-0.06	-0.66	-0.54	-0.77	-1.72	-0.98	-0.27	-0.22	1.28	-0.17	0.08	0.59	0.33	-4.19	0.16	0.23	-0.26	-0.25	-0.22	-0.32	-0.66	-1.71
Lsat_1_v5_gn_6_54820.1	0.39	0.23	1.4	1.26	-1.3	-1.3	-0.36	-0.22	0.01	0.17	0.1	-0.04	0.84	-0.86	-0.57	-0.26	0.38	-0.62	-0.1	-0.28	-0.38	-0.39	-3.92	-0.09	-0.35	-0.28	-0.2	-0.06	-0.12	0.05	0.42
Lsat_1_v5_gn_6_69061.1 (RPS11)	0.45	-0.23	0.6	0.58	-0.74	-0.83	-0.15	0.0	0.31	0.3	0.19	0.45	0.29	-1.37	-2.35	-0.07	0.03	1.52	-0.7	-0.13	0.08	0.31	-4.04	0.07	0.32	0.16	-0.76	0.69	-1.12	-0.7	-0.99
Lsat_1_v5_gn_6_69081.1 (RPL14)	0.43	0.02	0.18	0.77	-0.97	-1.12	-0.07	0.09	0.38	0.41	0.35	0.28	0.57	-2.05	-2.31	-0.51	0.19	1.53	-0.45	0.39	0.09	0.11	-2.94	0.29	-0.14	-0.15	0.05	0.1	-0.83	-0.76	-1.2
Lsat_1_v5_gn_7_76981.1 (MATK)	-0.03	-0.41	-0.22	0.7	-1.3	-1.24	0.19	-0.72	0.21	0.32	-0.12	-0.37	0.79	-1.66	-0.88	0.11	0.38	1.12	-0.26	0.3	0.39	0.05	-1.05	0.54	0.24	-0.01	0.11	0.49	-0.53	-0.78	-0.55
Lsat_1_v5_gn_8_85101.1 (MSS1)	0.62	0.4	1.73	2.25	-2.09	-1.79	-1.31	-0.28	-1.26	0.33	0.39	0.76	1.59	-3.52	-4.13	0.15	0.14	-1.33	-2.34	-1.09	-0.68	-0.26	-1.74	-1.23	-0.29	0.59	-0.6	-0.69	-2.9	-0.96	-0.38
Lsat_1_v5_gn_9_121741.1 (RAF36)	-0.72	-0.51	-0.44	0.52	-2.64	-2.51	0.1	-0.95	0.97	1.01	0.1	0.78	1.37	-2.61	-1.82	0.16	0.57	2.13	-1.82	0.08	0.35	-0.53	-4.0	0.17	-0.56	-0.48	-0.56	-0.04	-1.39	-1.03	-1.25
Lsat_1_v5_gn_9_39281.1 (RH10)	0.61	0.33	1.04	1.73	-2.61	-1.35	-0.05	-0.6	0.57	0.23	0.22	0.41	0.64	-2.49	-2.32	-0.62	0.16	0.6	-1.59	0.17	0.35	-0.1	-3.29	0.44	-0.14	-0.31	-0.09	0.35	-0.94	-1.4	-1.44
Lsat_1_v5_gn_9_43721.1 (YCF4)	-0.02	0.7	0.54	1.08	-0.65	-1.08	0.45	-0.24	0.08	0.24	-1.34	-0.8	-0.7	-2.58	-0.91	0.3	-0.3	1.86	-0.6	0.71	0.32	0.28	-0.78	-0.27	-0.24	-0.25	-0.63	-0.68	0.04	-0.55	-1.1
Lsat_1_v5_gn_9_62260.1 (STC8)	0.49	-0.37	1.05	1.63	-0.59	-0.01	0.56	0.31	-0.16	-0.2	-0.33	-0.02	1.18	-2.46	-1.51	-0.2	-0.32	-0.58	-1.19	-0.49	0.17	0.09	-0.48	-0.43	0.05	-0.01	0.31	-0.42	-0.67	-1.25	-0.48

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.