Coexpression cluster: Cluster_15 (Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901566 organonitrogen compound biosynthetic process 14.5% (19/131) 3.38 0.0 0.0
GO:0003735 structural constituent of ribosome 11.45% (15/131) 3.82 0.0 0.0
GO:0005840 ribosome 11.45% (15/131) 3.84 0.0 0.0
GO:0043604 amide biosynthetic process 11.45% (15/131) 3.76 0.0 0.0
GO:0043603 amide metabolic process 11.45% (15/131) 3.72 0.0 0.0
GO:0005198 structural molecule activity 11.45% (15/131) 3.65 0.0 0.0
GO:0043228 non-membrane-bounded organelle 11.45% (15/131) 3.57 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 11.45% (15/131) 3.57 0.0 0.0
GO:0006412 translation 10.69% (14/131) 3.73 0.0 0.0
GO:0043043 peptide biosynthetic process 10.69% (14/131) 3.7 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 13.74% (18/131) 3.07 0.0 0.0
GO:0006518 peptide metabolic process 10.69% (14/131) 3.67 0.0 0.0
GO:0044249 cellular biosynthetic process 15.27% (20/131) 2.82 0.0 0.0
GO:1901576 organic substance biosynthetic process 15.27% (20/131) 2.67 0.0 0.0
GO:0009058 biosynthetic process 16.03% (21/131) 2.58 0.0 0.0
GO:0009059 macromolecule biosynthetic process 10.69% (14/131) 3.01 0.0 0.0
GO:0043226 organelle 11.45% (15/131) 2.85 0.0 0.0
GO:0043229 intracellular organelle 11.45% (15/131) 2.86 0.0 0.0
GO:0044237 cellular metabolic process 20.61% (27/131) 1.59 0.0 3e-06
GO:0034641 cellular nitrogen compound metabolic process 13.74% (18/131) 2.04 0.0 5e-06
GO:1901564 organonitrogen compound metabolic process 16.03% (21/131) 1.56 8e-06 9.6e-05
GO:0110165 cellular anatomical entity 14.5% (19/131) 1.63 1.1e-05 0.000132
GO:0005575 cellular_component 16.79% (22/131) 1.45 1.6e-05 0.000176
GO:0009987 cellular process 22.9% (30/131) 1.05 7.4e-05 0.000795
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 2.29% (3/131) 4.99 0.000103 0.000886
GO:0006754 ATP biosynthetic process 2.29% (3/131) 4.99 0.000103 0.000886
GO:0009145 purine nucleoside triphosphate biosynthetic process 2.29% (3/131) 4.99 0.000103 0.000886
GO:0009142 nucleoside triphosphate biosynthetic process 2.29% (3/131) 4.99 0.000103 0.000886
GO:0009201 ribonucleoside triphosphate biosynthetic process 2.29% (3/131) 4.99 0.000103 0.000886
GO:0015986 proton motive force-driven ATP synthesis 2.29% (3/131) 4.99 0.000103 0.000886
GO:0004089 carbonate dehydratase activity 1.53% (2/131) 6.63 0.000135 0.001118
GO:0019538 protein metabolic process 12.21% (16/131) 1.51 0.000154 0.001238
GO:0008152 metabolic process 21.37% (28/131) 1.02 0.000216 0.001679
GO:0044281 small molecule metabolic process 6.11% (8/131) 2.26 0.000276 0.001864
GO:0046034 ATP metabolic process 2.29% (3/131) 4.55 0.000269 0.001865
GO:0009144 purine nucleoside triphosphate metabolic process 2.29% (3/131) 4.55 0.000269 0.001865
GO:0009199 ribonucleoside triphosphate metabolic process 2.29% (3/131) 4.55 0.000269 0.001865
GO:0009205 purine ribonucleoside triphosphate metabolic process 2.29% (3/131) 4.55 0.000269 0.001865
GO:0046390 ribose phosphate biosynthetic process 2.29% (3/131) 4.47 0.000314 0.001879
GO:0009152 purine ribonucleotide biosynthetic process 2.29% (3/131) 4.47 0.000314 0.001879
GO:0009260 ribonucleotide biosynthetic process 2.29% (3/131) 4.47 0.000314 0.001879
GO:0051536 iron-sulfur cluster binding 3.05% (4/131) 3.63 0.000306 0.001964
GO:0051540 metal cluster binding 3.05% (4/131) 3.63 0.000306 0.001964
GO:0009141 nucleoside triphosphate metabolic process 2.29% (3/131) 4.4 0.000365 0.002132
GO:0006807 nitrogen compound metabolic process 16.03% (21/131) 1.13 0.00055 0.003141
GO:0044238 primary metabolic process 18.32% (24/131) 1.0 0.00073 0.004078
GO:1990204 oxidoreductase complex 2.29% (3/131) 4.04 0.000779 0.004172
GO:0006164 purine nucleotide biosynthetic process 2.29% (3/131) 4.04 0.000779 0.004172
GO:0016491 oxidoreductase activity 11.45% (15/131) 1.33 0.000931 0.00469
GO:0072522 purine-containing compound biosynthetic process 2.29% (3/131) 3.94 0.000964 0.004764
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 1.53% (2/131) 5.4 0.000927 0.004767
GO:0015252 proton channel activity 1.53% (2/131) 5.4 0.000927 0.004767
GO:0009259 ribonucleotide metabolic process 2.29% (3/131) 3.89 0.001066 0.00498
GO:0019693 ribose phosphate metabolic process 2.29% (3/131) 3.89 0.001066 0.00498
GO:0009150 purine ribonucleotide metabolic process 2.29% (3/131) 3.89 0.001066 0.00498
GO:0098796 membrane protein complex 3.82% (5/131) 2.68 0.001141 0.005235
GO:0015078 proton transmembrane transporter activity 2.29% (3/131) 3.84 0.001174 0.005294
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 1.53% (2/131) 5.21 0.001231 0.005455
GO:0009165 nucleotide biosynthetic process 2.29% (3/131) 3.8 0.001289 0.005523
GO:1901293 nucleoside phosphate biosynthetic process 2.29% (3/131) 3.8 0.001289 0.005523
GO:0071704 organic substance metabolic process 18.32% (24/131) 0.93 0.001514 0.006379
GO:0006091 generation of precursor metabolites and energy 2.29% (3/131) 3.71 0.00154 0.006385
GO:0005261 monoatomic cation channel activity 1.53% (2/131) 5.04 0.001576 0.006429
GO:0006163 purine nucleotide metabolic process 2.29% (3/131) 3.51 0.002295 0.009218
GO:0008324 monoatomic cation transmembrane transporter activity 3.05% (4/131) 2.84 0.002408 0.009236
GO:0051537 2 iron, 2 sulfur cluster binding 1.53% (2/131) 4.75 0.002386 0.009293
GO:0009084 glutamine family amino acid biosynthetic process 1.53% (2/131) 4.75 0.002386 0.009293
GO:0072521 purine-containing compound metabolic process 2.29% (3/131) 3.44 0.002651 0.010021
GO:0009064 glutamine family amino acid metabolic process 1.53% (2/131) 4.63 0.002851 0.010467
GO:1901137 carbohydrate derivative biosynthetic process 2.29% (3/131) 3.4 0.002841 0.010583
GO:0055114 obsolete oxidation-reduction process 9.92% (13/131) 1.25 0.003358 0.012154
GO:0019752 carboxylic acid metabolic process 3.82% (5/131) 2.3 0.00361 0.01271
GO:0043436 oxoacid metabolic process 3.82% (5/131) 2.3 0.00361 0.01271
GO:0006082 organic acid metabolic process 3.82% (5/131) 2.29 0.003713 0.012724
GO:0022890 inorganic cation transmembrane transporter activity 3.05% (4/131) 2.66 0.003775 0.012766
GO:0009117 nucleotide metabolic process 2.29% (3/131) 3.27 0.003684 0.012795
GO:0032787 monocarboxylic acid metabolic process 2.29% (3/131) 3.24 0.003916 0.012904
GO:0019843 rRNA binding 1.53% (2/131) 4.4 0.003896 0.013005
GO:0006753 nucleoside phosphate metabolic process 2.29% (3/131) 3.21 0.004157 0.013523
GO:0016836 hydro-lyase activity 1.53% (2/131) 4.31 0.004476 0.014202
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors 1.53% (2/131) 4.31 0.004476 0.014202
GO:0015075 monoatomic ion transmembrane transporter activity 3.05% (4/131) 2.51 0.005406 0.016944
GO:0016053 organic acid biosynthetic process 2.29% (3/131) 3.02 0.006093 0.018209
GO:0046394 carboxylic acid biosynthetic process 2.29% (3/131) 3.02 0.006093 0.018209
GO:0003674 molecular_function 42.75% (56/131) 0.42 0.005989 0.018544
GO:0003824 catalytic activity 25.95% (34/131) 0.61 0.006081 0.018605
GO:0009654 photosystem II oxygen evolving complex 1.53% (2/131) 4.04 0.006437 0.019014
GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity 0.76% (1/131) 7.21 0.006745 0.019478
GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors 0.76% (1/131) 7.21 0.006745 0.019478
GO:0055086 nucleobase-containing small molecule metabolic process 2.29% (3/131) 2.94 0.007063 0.020168
GO:1902494 catalytic complex 3.05% (4/131) 2.34 0.008153 0.023027
GO:0006096 glycolytic process 1.53% (2/131) 3.82 0.008719 0.024356
GO:0006090 pyruvate metabolic process 1.53% (2/131) 3.75 0.009549 0.026387
GO:0043170 macromolecule metabolic process 12.21% (16/131) 0.93 0.009828 0.02687
GO:0090407 organophosphate biosynthetic process 2.29% (3/131) 2.73 0.010495 0.028096
GO:0009523 photosystem II 1.53% (2/131) 3.69 0.010412 0.028168
GO:0015318 inorganic molecular entity transmembrane transporter activity 3.05% (4/131) 2.22 0.010798 0.028609
GO:0004618 phosphoglycerate kinase activity 0.76% (1/131) 6.21 0.013445 0.031413
GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor 0.76% (1/131) 6.21 0.013445 0.031413
GO:0098809 nitrite reductase activity 0.76% (1/131) 6.21 0.013445 0.031413
GO:0006537 glutamate biosynthetic process 0.76% (1/131) 6.21 0.013445 0.031413
GO:0006536 glutamate metabolic process 0.76% (1/131) 6.21 0.013445 0.031413
GO:0008942 nitrite reductase [NAD(P)H] activity 0.76% (1/131) 6.21 0.013445 0.031413
GO:0042651 thylakoid membrane 0.76% (1/131) 6.21 0.013445 0.031413
GO:0004751 ribose-5-phosphate isomerase activity 0.76% (1/131) 6.21 0.013445 0.031413
GO:0034357 photosynthetic membrane 0.76% (1/131) 6.21 0.013445 0.031413
GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors 0.76% (1/131) 6.21 0.013445 0.031413
GO:0015930 glutamate synthase activity 0.76% (1/131) 6.21 0.013445 0.031413
GO:0009052 pentose-phosphate shunt, non-oxidative branch 0.76% (1/131) 6.21 0.013445 0.031413
GO:1901607 alpha-amino acid biosynthetic process 1.53% (2/131) 3.51 0.013201 0.034618
GO:0044283 small molecule biosynthetic process 2.29% (3/131) 2.49 0.016345 0.037174
GO:0016052 carbohydrate catabolic process 1.53% (2/131) 3.35 0.016275 0.037346
GO:0005216 monoatomic ion channel activity 1.53% (2/131) 3.35 0.016275 0.037346
GO:0016774 phosphotransferase activity, carboxyl group as acceptor 0.76% (1/131) 5.63 0.020101 0.044153
GO:0043650 dicarboxylic acid biosynthetic process 0.76% (1/131) 5.63 0.020101 0.044153
GO:1901135 carbohydrate derivative metabolic process 2.29% (3/131) 2.39 0.019831 0.044318
GO:0009055 electron transfer activity 2.29% (3/131) 2.39 0.019831 0.044318
GO:0009521 photosystem 1.53% (2/131) 3.12 0.022003 0.047921
GO:0019637 organophosphate metabolic process 2.29% (3/131) 2.32 0.022365 0.048301
GO:0016874 ligase activity 2.29% (3/131) 2.31 0.023025 0.049312
GO:0008652 amino acid biosynthetic process 1.53% (2/131) 3.08 0.023235 0.049349
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_204 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_4 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_178 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (131) (download table)

InterPro Domains

GO Terms

Family Terms