Coexpression cluster: Cluster_56 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0042625 ATPase-coupled ion transmembrane transporter activity 4.84% (3/62) 7.14 1e-06 5.4e-05
GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity 4.84% (3/62) 7.14 1e-06 5.4e-05
GO:0046961 proton-transporting ATPase activity, rotational mechanism 4.84% (3/62) 7.14 1e-06 5.4e-05
GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism 4.84% (3/62) 7.14 1e-06 5.4e-05
GO:0033176 proton-transporting V-type ATPase complex 3.23% (2/62) 9.14 3e-06 8.3e-05
GO:0016471 vacuolar proton-transporting V-type ATPase complex 3.23% (2/62) 9.14 3e-06 8.3e-05
GO:0016469 proton-transporting two-sector ATPase complex 3.23% (2/62) 9.14 3e-06 8.3e-05
GO:0022853 active monoatomic ion transmembrane transporter activity 4.84% (3/62) 6.55 4e-06 0.0001
GO:0048193 Golgi vesicle transport 4.84% (3/62) 6.26 8e-06 0.000167
GO:0016192 vesicle-mediated transport 6.45% (4/62) 4.85 1.2e-05 0.000219
GO:1902600 proton transmembrane transport 4.84% (3/62) 5.86 1.9e-05 0.000295
GO:1904949 ATPase complex 3.23% (2/62) 8.14 1.9e-05 0.000316
GO:0015078 proton transmembrane transporter activity 4.84% (3/62) 5.33 5.8e-05 0.000841
GO:0051179 localization 12.9% (8/62) 2.44 0.000107 0.001114
GO:0034220 monoatomic ion transmembrane transport 4.84% (3/62) 5.05 0.000105 0.001153
GO:0098655 monoatomic cation transmembrane transport 4.84% (3/62) 5.08 9.9e-05 0.001155
GO:0051234 establishment of localization 12.9% (8/62) 2.46 9.6e-05 0.001199
GO:0098662 inorganic cation transmembrane transport 4.84% (3/62) 4.97 0.000124 0.001224
GO:0098660 inorganic ion transmembrane transport 4.84% (3/62) 4.94 0.000131 0.001229
GO:0006810 transport 12.9% (8/62) 2.47 9.4e-05 0.001252
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport 3.23% (2/62) 6.44 0.00024 0.002133
GO:0005575 cellular_component 17.74% (11/62) 1.68 0.00055 0.004673
GO:0042626 ATPase-coupled transmembrane transporter activity 4.84% (3/62) 4.11 0.000722 0.005866
GO:0022890 inorganic cation transmembrane transporter activity 4.84% (3/62) 4.03 0.000834 0.006496
GO:0015399 primary active transmembrane transporter activity 4.84% (3/62) 3.94 0.001008 0.007543
GO:0008324 monoatomic cation transmembrane transporter activity 4.84% (3/62) 3.91 0.001062 0.00764
GO:0015318 inorganic molecular entity transmembrane transporter activity 4.84% (3/62) 3.85 0.001205 0.008344
GO:0043226 organelle 8.06% (5/62) 2.58 0.001512 0.00975
GO:0043229 intracellular organelle 8.06% (5/62) 2.58 0.001512 0.00975
GO:0006812 monoatomic cation transport 4.84% (3/62) 3.7 0.00163 0.009833
GO:0098796 membrane protein complex 4.84% (3/62) 3.71 0.001594 0.009939
GO:0009987 cellular process 22.58% (14/62) 1.22 0.002128 0.012434
GO:0015075 monoatomic ion transmembrane transporter activity 4.84% (3/62) 3.43 0.002787 0.01579
GO:0006811 monoatomic ion transport 4.84% (3/62) 3.29 0.003602 0.018708
GO:0022804 active transmembrane transporter activity 4.84% (3/62) 3.28 0.00372 0.018802
GO:0030008 TRAPP complex 1.61% (1/62) 8.14 0.003552 0.01898
GO:0033180 proton-transporting V-type ATPase, V1 domain 1.61% (1/62) 8.14 0.003552 0.01898
GO:0032991 protein-containing complex 6.45% (4/62) 2.63 0.004005 0.01971
GO:1901657 glycosyl compound metabolic process 1.61% (1/62) 7.14 0.007092 0.033157
GO:0009116 nucleoside metabolic process 1.61% (1/62) 7.14 0.007092 0.033157
GO:0006850 mitochondrial pyruvate transmembrane transport 1.61% (1/62) 6.55 0.01062 0.045136
GO:1901475 pyruvate transmembrane transport 1.61% (1/62) 6.55 0.01062 0.045136
GO:0006848 pyruvate transport 1.61% (1/62) 6.55 0.01062 0.045136
GO:0015718 monocarboxylic acid transport 1.61% (1/62) 6.55 0.01062 0.045136
GO:0005840 ribosome 4.84% (3/62) 2.69 0.011325 0.047062
GO:0043043 peptide biosynthetic process 4.84% (3/62) 2.63 0.012649 0.047309
GO:0046907 intracellular transport 3.23% (2/62) 3.37 0.016201 0.047337
GO:0051649 establishment of localization in cell 3.23% (2/62) 3.37 0.016201 0.047337
GO:0006518 peptide metabolic process 4.84% (3/62) 2.57 0.014191 0.047389
GO:0003735 structural constituent of ribosome 4.84% (3/62) 2.64 0.012525 0.047801
GO:0005198 structural molecule activity 4.84% (3/62) 2.56 0.014593 0.047875
GO:0005743 mitochondrial inner membrane 1.61% (1/62) 6.14 0.014136 0.04806
GO:0019866 organelle inner membrane 1.61% (1/62) 6.14 0.014136 0.04806
GO:1903825 organic acid transmembrane transport 1.61% (1/62) 6.14 0.014136 0.04806
GO:1905039 carboxylic acid transmembrane transport 1.61% (1/62) 6.14 0.014136 0.04806
GO:0005739 mitochondrion 1.61% (1/62) 6.33 0.012379 0.048228
GO:0004045 aminoacyl-tRNA hydrolase activity 1.61% (1/62) 6.33 0.012379 0.048228
GO:0043603 amide metabolic process 4.84% (3/62) 2.5 0.01612 0.04862
GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain 1.61% (1/62) 5.97 0.015888 0.048707
GO:0051537 2 iron, 2 sulfur cluster binding 1.61% (1/62) 5.97 0.015888 0.048707
GO:0006412 translation 4.84% (3/62) 2.66 0.012037 0.048932
GO:0003924 GTPase activity 3.23% (2/62) 3.32 0.017339 0.049883
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_56 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_84 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_133 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_142 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_144 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_173 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_219 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_255 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_263 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_29 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_48 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_49 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_62 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_91 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_102 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_146 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_152 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_187 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_220 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_225 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_11 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_18 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_19 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_23 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_24 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_25 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_27 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_46 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_47 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_53 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_68 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_74 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_79 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_88 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_90 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_98 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_100 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_121 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_123 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_138 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_148 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_162 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_164 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_185 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_250 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_356 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_431 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_6 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_150 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (62) (download table)

InterPro Domains

GO Terms

Family Terms