Coexpression cluster: Cluster_96 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016161 beta-amylase activity 3.39% (2/59) 7.04 0.000101 0.007872
GO:0000272 polysaccharide catabolic process 3.39% (2/59) 7.04 0.000101 0.007872
GO:0016160 amylase activity 3.39% (2/59) 6.46 0.000234 0.012186
GO:0015979 photosynthesis 3.39% (2/59) 4.08 0.006304 0.040974
GO:0006405 RNA export from nucleus 1.69% (1/59) 7.37 0.006052 0.041046
GO:1902680 positive regulation of RNA biosynthetic process 1.69% (1/59) 7.37 0.006052 0.041046
GO:0050658 RNA transport 1.69% (1/59) 7.37 0.006052 0.041046
GO:0006406 mRNA export from nucleus 1.69% (1/59) 7.37 0.006052 0.041046
GO:0050657 nucleic acid transport 1.69% (1/59) 7.37 0.006052 0.041046
GO:0051028 mRNA transport 1.69% (1/59) 7.37 0.006052 0.041046
GO:0045893 positive regulation of DNA-templated transcription 1.69% (1/59) 7.37 0.006052 0.041046
GO:0051254 positive regulation of RNA metabolic process 1.69% (1/59) 7.37 0.006052 0.041046
GO:0051236 establishment of RNA localization 1.69% (1/59) 7.37 0.006052 0.041046
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 1.69% (1/59) 7.37 0.006052 0.041046
GO:0051168 nuclear export 1.69% (1/59) 7.37 0.006052 0.041046
GO:0000124 SAGA complex 1.69% (1/59) 9.37 0.001516 0.047309
GO:0003713 transcription coactivator activity 1.69% (1/59) 9.37 0.001516 0.047309
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_255 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_20 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_31 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_61 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_62 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_71 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_89 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_94 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_142 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_145 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_151 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_152 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_174 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_213 0.018 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_214 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_218 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_242 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (59) (download table)

InterPro Domains

GO Terms

Family Terms