Description : not classified
Gene families : OG0005849 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005849_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr3.03192 | |
Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_100 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Spov3_chr1.02790 | emb1745, AtGLE1, GLE1 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr5.02228 | emb1745, AtGLE1, GLE1 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000154 | rRNA modification | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0001510 | RNA methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008170 | N-methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008649 | rRNA methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016436 | rRNA (uridine) methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0031167 | rRNA methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0032259 | methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0043414 | macromolecule methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0070042 | rRNA (uridine-N3-)-methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0070475 | rRNA base methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Spinacia oleracea GO terms from Neighborhoods |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002156 | RNaseH_domain | 5 | 112 |
No external refs found! |