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Aliases : ACM1, EMB1270
Description : not classified
Gene families : OG0000033 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000033_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr3.02988 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_51 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_C0001.00062 | GPX3, ATGPX3, GPXL3 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0008.00049 | GPX3, ATGPX3, GPXL3 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0010.00001 | GPX3, ATGPX3, GPXL3 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0021.00030 | LCV1 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0038.00027 | AtDOB13 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0043.00016 | NdhK, PSBG | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0072.00002 | GPX3, ATGPX3, GPXL3 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S01.00164 | AtBBE21, OGOX2 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S01.00177 | ACM1, EMB1270 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S14.00010 | No alias | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.00634 | atnudt20, NUDT20 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.02629 | GPX3, ATGPX3, GPXL3 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.00481 | GPX3, ATGPX3, GPXL3 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.02198 | ACM1, EMB1270 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.03258 | GPX3, ATGPX3, GPXL3 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.04818 | HOS15, OLI1 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02673 | MEL1, NPY5 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006644 | phospholipid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006664 | glycolipid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008915 | lipid-A-disaccharide synthase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009245 | lipid A biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0043226 | organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0043229 | intracellular organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0046493 | lipid A metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901269 | lipooligosaccharide metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901271 | lipooligosaccharide biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| No external refs found! |