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  5. Spov3_chr3.02895

Spov3_chr3.02895 (VPS9, ATVPS9A, VPS9A)


Aliases : VPS9, ATVPS9A, VPS9A

Description : not classified


Gene families : OG0001378 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.02895
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr1.02795 VPS9, ATVPS9A, VPS9A not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.00897 VPS9, ATVPS9A, VPS9A not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
BP GO:0006952 defense response IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0000775 chromosome, centromeric region IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005092 GDP-dissociation inhibitor activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007049 cell cycle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007264 small GTPase mediated signal transduction IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0098687 chromosomal region IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004326 Mlo 19 65
No external refs found!