Spov3_chr3.02811 (CHA19, CHR19, ETL1)

Aliases : CHA19, CHR19, ETL1

Description : ATPase component *(Etl1)

Gene families : OG0067151 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr3.02811
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_156

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEA	Interproscan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001181	RNA polymerase I general transcription initiation factor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004177	aminopeptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004525	ribonuclease III activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004652	obsolete polynucleotide adenylyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005096	GTPase activator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005634	nucleus	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005694	chromosome	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005956	protein kinase CK2 complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006354	DNA-templated transcription elongation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006361	transcription initiation at RNA polymerase I promoter	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006368	transcription elongation by RNA polymerase II	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0008023	transcription elongation factor complex	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008047	enzyme activator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008235	metalloexopeptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009719	response to endogenous stimulus	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009725	response to hormone	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010033	response to organic substance	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0010181	FMN binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015693	magnesium ion transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016570	histone modification	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0016593	Cdc73/Paf1 complex	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016887	ATP hydrolysis activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019207	kinase regulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019887	protein kinase regulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0022834	ligand-gated channel activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0022836	gated channel activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0022839	monoatomic ion gated channel activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0030234	enzyme regulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0030695	GTPase regulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0036211	protein modification process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0042221	response to chemical	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0042393	histone binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043170	macromolecule metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043631	obsolete RNA polyadenylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043687	post-translational protein modification	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051726	regulation of cell cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0070006	metalloaminopeptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0098772	molecular function regulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140223	general transcription initiation factor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140677	molecular function activator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:1902554	serine/threonine protein kinase complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:1902911	protein kinase complex	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000330	SNF2_N	230	520
IPR001650	Helicase_C	590	702

External Links

No external refs found!

Spov3_chr3.02811 (CHA19, CHR19, ETL1)

Expression Profile

Co-expression Networks

Functional Annotation