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  5. Bra009979

Bra009979


Description : not classified


Gene families : OG0003088 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra009979
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_3


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006974 DNA damage response IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Brassica rapa GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR046848 E_motif 512 574
IPR002885 Pentatricopeptide_rpt 117 164
IPR002885 Pentatricopeptide_rpt 393 440
IPR002885 Pentatricopeptide_rpt 294 339
IPR002885 Pentatricopeptide_rpt 220 249
IPR002885 Pentatricopeptide_rpt 468 491
IPR002885 Pentatricopeptide_rpt 192 217
No external refs found!