1. Home
  2. Species
  3. Spinacia oleracea
  4. Sequence
  5. Spov3_chr3.02019

Spov3_chr3.02019


Description : cysteine-tRNA ligase. EC_6.1 ligase forming carbon-oxygen bond


Gene families : OG0067646 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.02019
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_156


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003674 molecular_function IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004674 protein serine/threonine kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004842 ubiquitin-protein transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005488 binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005685 U1 snRNP IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006354 DNA-templated transcription elongation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006368 transcription elongation by RNA polymerase II IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006376 mRNA splice site recognition IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006479 protein methylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006887 exocytosis IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0008023 transcription elongation factor complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008213 protein alkylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016567 protein ubiquitination IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016571 histone methylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0016593 Cdc73/Paf1 complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016755 aminoacyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018022 peptidyl-lysine methylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0018024 obsolete histone lysine N-methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018205 peptidyl-lysine modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0022618 protein-RNA complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031047 regulatory ncRNA-mediated gene silencing IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032446 protein modification by small protein conjugation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032940 secretion by cell IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034968 histone lysine methylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043414 macromolecule methylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043545 molybdopterin cofactor metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046903 secretion IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051189 prosthetic group metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070646 protein modification by small protein removal IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071826 protein-RNA complex organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0097525 spliceosomal snRNP complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0099023 vesicle tethering complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0120114 Sm-like protein family complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0140352 export from cell IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR032678 tRNA-synt_1_cat_dom 26 328
No external refs found!