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  5. Spov3_chr3.01340

Spov3_chr3.01340


Description : component *(U11/U12-25K) of U11/U12 snRNP complex


Gene families : OG0002601 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002601_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.01340
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr3.01347 No alias component *(U11/U12-25K) of U11/U12 snRNP complex 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01349 No alias component *(U11/U12-25K) of U11/U12 snRNP complex 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.03167 No alias component *(U11/U12-25K) of U11/U12 snRNP complex 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006974 DNA damage response IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR040610 SNRNP25_ubiquitin 75 125
No external refs found!