Spov3_chr3.01089 (ATUBP4, UBP4)


Aliases : ATUBP4, UBP4

Description : deubiquitinase *(UBP3-4)


Gene families : OG0066836 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.01089
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_126


Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0000347 THO complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0000445 THO complex part of transcription export complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004478 methionine adenosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005096 GTPase activator activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005761 mitochondrial ribosome IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006790 sulfur compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008047 enzyme activator activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046500 S-adenosylmethionine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140677 molecular function activator activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 23 359
No external refs found!