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Description : not classified
Gene families : OG0000005 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000005_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr3.01025 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_81 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_C0001.00127 | GT2L, AtGT2L | not classified | 0.13 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0001.00209 | No alias | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0002.00005 | HISN7, IMPL2 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0007.00032 | No alias | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0016.00013 | GT2L, AtGT2L | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0016.00031 | CYP96A12 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0016.00037 | RPB5D | not classified | 0.12 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0021.00015 | RPB5D | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0021.00018 | GGL20 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0021.00034 | HISN7, IMPL2 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0026.00014 | No alias | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0026.00025 | EXO70H5, ATEXO70H5 | not classified | 0.15 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0051.00014 | RPB5D | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0066.00007 | MAGL15 | not classified | 0.13 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0068.00005 | GT2L, AtGT2L | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0077.00012 | HISN7, IMPL2 | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0281.00003 | RPB5D | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.01140 | SEC31A | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.01195 | RPB5D | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.01247 | NHL2 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.01546 | GT2L, AtGT2L | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.01605 | EXO70H5, ATEXO70H5 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.01669 | GT2L, AtGT2L | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.01671 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.01700 | No alias | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.02166 | RPB5D | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.02192 | AtABCB4, MDR4,... | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.02316 | RPB5D | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.02518 | GT2L, AtGT2L | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.02597 | No alias | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.03505 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.04364 | RPB5D | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.02602 | No alias | not classified | 0.12 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.02686 | RPB5D | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.04142 | HISN7, IMPL2 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.04158 | RPB5D | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.04180 | RPB5D | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.04494 | RPB5D | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.04519 | No alias | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.04909 | RPB5D | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.04924 | CUL4, ATCUL4 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.04954 | RPB5D | not classified | 0.12 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.05038 | RPB5D | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.05321 | RPB5D | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.05717 | MUS81, ATMUS81 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.00380 | AtCYS2, CYS2 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.00381 | MUS81, ATMUS81 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.00461 | No alias | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.00971 | GT2L, AtGT2L | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01230 | MUS81, ATMUS81 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01868 | No alias | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.02252 | PQT3 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.02282 | ATWRNEXO, WEX,... | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.02485 | RPB5D | not classified | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.02790 | No alias | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.03006 | No alias | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.00757 | No alias | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.01149 | RPB5D | not classified | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.01153 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.01201 | GT2L, AtGT2L | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.01548 | No alias | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.01608 | MUS81, ATMUS81 | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.01609 | No alias | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.02018 | DCAF1 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.02311 | RH6 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.02490 | MUS81, ATMUS81 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.02776 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.02814 | No alias | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.02925 | RPB5D | not classified | 0.12 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.03537 | RPB5D | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.03971 | RPB5D | not classified | 0.14 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.04381 | OXS3, ATOXS3 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.01340 | HISN7, IMPL2 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02138 | GT2L, AtGT2L | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02140 | RPB5D | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02403 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02758 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02824 | GGL20 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.03159 | HISN7, IMPL2 | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006325 | chromatin organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006334 | nucleosome assembly | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006338 | chromatin remodeling | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0032993 | protein-DNA complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0034728 | nucleosome organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0042254 | ribosome biogenesis | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071824 | protein-DNA complex organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |