Heatmap: Cluster_81 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
0.6 0.88 -0.3 -0.31 0.58 -0.16 -0.95 -1.14 -0.46 0.01 -0.89 -0.77 0.28 -1.28 -1.6 -1.36 -1.35 -0.19 -0.96 -1.05 -0.96 -1.05 1.88 1.72 -0.3 -0.74 -0.76 0.38 0.59 0.5
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
0.47 0.52 -1.91 -3.72 1.6 0.96 -2.58 -4.09 -4.38 -1.75 -2.45 -1.81 1.03 -7.65 -5.59 -3.25 -4.75 1.07 -3.63 -2.81 -2.21 -2.69 0.24 3.12 0.28 -1.41 -1.9 0.39 -0.8 1.18
- - - - - - - - - - - - 4.55 - - - - - - - - - -1.16 - - - - 2.6 - -
- - - - - - - - 3.3 3.1 2.24 - - - - - 1.83 - - - - - - - 1.72 - - - - -
- - - - - - - - 3.15 - - - 4.4 - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
1.37 1.12 -1.46 -0.69 1.01 0.04 -1.47 -1.45 -0.3 0.39 -0.91 -0.72 0.49 -0.98 -2.72 -1.93 -0.95 1.3 -1.51 -0.8 -1.19 -0.78 0.41 1.35 0.22 -0.17 -0.19 0.43 -0.87 0.36
- - - - 2.42 - - - - - - - 4.62 - - - - - - - - - - - - -19.55 - - - -21.85
0.23 0.28 0.09 0.3 0.05 -0.08 -0.04 0.31 -0.05 -0.03 -0.09 -0.33 0.07 -0.01 -0.04 0.26 -0.27 0.42 -0.01 -0.49 -0.16 -0.09 -0.22 -0.22 -0.37 -0.06 -0.02 0.15 -0.05 0.02
-0.17 -0.26 -0.32 -0.04 0.29 0.21 0.28 -0.05 -0.08 -0.06 0.09 0.1 0.22 -0.24 -0.12 0.03 -0.16 -0.28 0.09 -0.01 -0.15 -0.12 0.46 -0.24 0.02 -0.02 0.26 -0.23 -0.19 0.25
0.29 0.26 -0.74 -0.72 0.17 -0.17 -0.0 -0.06 -0.79 0.02 -0.34 -0.54 0.56 0.82 -0.18 -0.31 -0.21 0.41 -0.34 -0.43 -0.48 -0.39 0.59 0.81 0.21 -0.12 -0.25 0.07 -0.05 -0.01
1.24 0.94 -0.02 -0.68 0.87 -0.18 -1.35 -0.84 -1.54 -0.33 -0.68 -0.96 -1.2 -1.2 -1.27 -1.58 -0.33 0.88 -1.29 -0.13 -0.89 -0.78 1.95 1.18 -0.47 -0.83 -0.81 0.49 -0.33 0.35
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
0.53 0.71 -0.25 -0.83 0.73 0.29 -0.26 -0.59 -0.52 0.1 -0.61 -0.12 0.26 0.1 -0.49 -0.55 -0.73 0.93 -0.43 -0.31 -0.37 -0.32 -0.5 0.95 -0.06 -0.19 -0.31 0.25 0.05 -0.04
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
- 1.24 - - - - - - - - - - 4.35 - - - - - - - - - - - - - - 2.87 - -
1.02 1.13 0.01 -0.55 0.55 -0.09 -0.47 -0.73 -0.64 -0.05 -0.38 -0.1 0.36 -1.06 -1.28 -0.97 -1.78 1.01 -0.45 -0.48 -0.53 -0.32 -0.29 1.14 -0.03 -0.15 -0.25 0.49 -0.07 0.02
0.76 1.43 -0.07 -1.32 0.94 0.63 -0.94 -1.42 -0.68 -0.56 -1.53 -0.74 0.88 -0.59 -2.08 - -2.88 0.63 -0.1 - -1.43 -1.18 2.39 -1.5 -1.04 0.49 0.05 0.77 -1.02 -0.38
- - - - - - - - - - - - 4.19 - - 1.43 - - - - - 1.22 - - - - - - - 2.75
Spov3_chr2.02190 (CYP707A2)
0.18 0.98 -0.73 -2.13 -0.55 -0.05 -0.28 -0.37 -0.95 -0.06 -0.34 -0.36 0.44 -0.89 -0.61 -1.15 -1.0 -0.69 -0.17 -0.58 -0.24 -0.18 1.38 1.37 0.37 0.21 -0.14 0.94 0.42 -0.83
- - 1.98 - - 2.06 - - - - - - 4.45 - - - - - - - - - - - - - - - - -
- 1.28 - - - - -0.12 1.19 - 0.1 - 1.54 2.56 - - 1.21 - - - - - 1.41 1.0 - 0.03 0.11 1.04 - 1.23 0.06
1.22 1.21 -2.15 - 1.52 -2.46 - - -1.31 1.68 -2.08 1.51 0.24 -0.64 - - - 1.27 - -2.5 -0.33 -1.37 0.89 1.33 -1.41 0.81 -2.16 -0.12 0.15 0.04
1.26 0.75 -0.31 -1.82 1.22 -0.45 -1.3 0.88 0.2 1.37 -2.76 0.64 0.75 0.09 -0.19 -0.55 -0.79 -1.48 -1.75 - -2.92 -1.0 0.77 -0.05 -2.87 0.42 -0.23 0.76 0.16 -3.02
-0.47 -0.81 -0.93 -3.57 1.6 -0.05 -2.38 -1.28 -1.31 -1.79 - 0.13 -0.11 -0.95 -1.5 -1.8 -3.3 2.4 -2.42 -1.52 0.17 - 1.44 1.31 -0.26 0.81 -1.97 0.28 0.48 0.98
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
0.44 0.34 -0.1 -0.2 0.41 0.16 -0.21 -0.07 -0.18 0.07 -0.08 0.16 -0.0 -0.24 -0.48 -0.6 -0.8 -0.05 -0.28 -0.29 -0.16 -0.06 0.03 0.53 0.04 0.09 -0.03 0.3 0.05 0.33
-0.36 -0.38 -0.65 -0.61 0.07 0.63 0.2 0.25 -0.54 -0.38 0.07 0.34 0.73 -1.37 -0.09 -0.41 -0.36 0.56 -0.16 0.09 -0.15 0.06 0.01 0.37 0.1 0.25 -0.12 -0.36 -0.47 0.66
1.19 0.6 - - 1.58 -0.16 - 2.37 1.96 2.33 1.21 - - - - 0.57 - 0.2 0.19 - 0.04 - - - - 0.11 - - - -
- 1.53 - - - - - - 2.68 - - - 3.17 - - - - - - - - 2.28 - - - - 2.08 - - 1.39
-0.33 -0.07 -0.2 -0.74 0.46 1.11 0.57 0.7 -0.63 -0.85 -0.46 -0.41 -0.77 -0.69 -0.92 -0.8 -1.36 0.95 0.01 0.36 -0.04 0.22 -0.12 0.59 0.34 0.32 0.04 -0.79 -0.51 0.19
0.51 0.85 - - - - 1.27 2.32 - 2.35 2.35 - - - 0.18 - 0.56 - - - - - - 0.76 - - 2.28 - - -
- -0.2 - -0.29 1.05 -0.52 -0.59 0.73 -0.51 1.91 1.73 -0.42 0.6 -0.51 0.49 0.6 - - 1.32 -0.68 -0.8 - -0.56 -0.23 - 0.42 1.05 -0.13 - -
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
0.81 0.84 -0.4 -0.97 0.72 0.83 -0.41 -0.82 -0.97 -0.12 -1.09 -0.61 0.26 -0.13 -0.89 -0.69 -0.94 0.47 -0.82 -0.82 -0.79 -0.86 0.41 1.08 -0.32 -0.67 -0.75 0.22 0.57 1.22
- - - - 3.11 - - - 3.36 - - - 3.27 - - 0.55 - - - - - - - - - - - - - -
- - - - - - - - 3.36 3.32 - - - - 3.29 - - - - - - - - - - - - - - -
1.68 1.82 1.16 - - - - 1.44 - 1.37 - - 3.38 - - - - - - - - 1.13 1.64 - - - - - - -
0.71 0.49 -0.32 -0.41 1.29 0.24 -1.71 -1.15 -1.12 0.09 -1.14 -0.66 0.41 -3.51 -2.6 -2.71 -2.79 2.11 -1.32 -0.73 -0.51 -1.39 0.82 1.59 -0.12 -0.25 -0.75 0.33 -0.61 0.11
-0.36 -0.4 -0.71 -0.79 0.49 0.42 -0.06 0.64 -0.83 -0.3 -0.19 0.14 0.49 -3.46 -1.5 -1.7 -1.98 0.37 -0.21 0.27 0.16 0.19 -0.38 1.24 0.66 0.46 0.11 0.04 -0.33 0.71
0.22 0.23 -0.01 0.12 0.04 0.09 0.1 0.06 0.11 0.13 0.04 -0.06 0.02 -0.37 -0.11 -0.16 -0.21 -0.65 -0.34 -0.09 -0.18 -0.29 0.48 0.09 0.05 -0.19 0.06 0.24 0.26 -0.16
0.69 2.07 -2.09 -18.54 0.65 0.25 -1.57 - -0.84 -0.28 -1.07 -2.59 1.45 -1.18 -0.53 - - 0.89 - 1.19 -0.87 0.61 -1.04 2.16 -0.82 -0.49 -0.14 -0.67 -1.68 -0.56
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
- - - - - - - - 3.05 - - - 3.96 - - - - 2.62 - - - - - - - - - - - -
-0.13 -0.31 -0.19 -0.28 -0.02 0.12 0.18 -0.08 -0.1 -0.01 0.02 -0.05 0.1 0.06 0.0 -0.04 -0.07 -0.16 0.15 0.12 0.09 0.05 0.19 -0.04 -0.05 0.16 0.19 -0.14 -0.15 0.21
Spov3_chr4.02667 (SULTR4;2)
0.71 0.83 -0.13 -0.72 0.43 0.81 -0.13 -0.72 -0.54 -0.09 -0.53 -0.22 0.54 0.44 -0.01 -0.07 -0.34 0.27 -0.44 -0.35 -0.39 -0.21 -0.42 0.29 -0.57 -0.2 -0.63 0.16 -0.09 0.2
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
0.34 0.63 -0.78 -1.25 0.65 0.63 -0.9 -0.98 -0.81 0.12 -0.46 0.05 1.33 -1.13 -1.38 -1.34 -1.73 0.8 -0.55 -0.46 -0.7 -0.68 -0.01 1.3 0.1 0.01 -0.47 0.21 0.07 0.77
Spov3_chr4.03625 (GGCT2;2)
0.74 1.37 -0.33 -0.63 0.96 0.88 -0.83 -1.19 -0.84 0.14 -0.86 -0.55 0.17 -0.74 -0.89 -0.27 -0.6 0.88 -0.75 -0.82 -0.6 -0.8 -0.05 1.0 -0.37 -0.15 -0.71 -0.19 -0.17 0.7
0.98 0.64 -2.86 - -2.15 0.54 - -1.91 -1.77 - -3.03 -0.81 3.19 - - -1.44 -1.95 2.18 - -0.87 - -1.17 2.14 0.59 -1.1 -0.11 -1.51 - - -1.11
0.37 1.06 -1.89 -3.79 0.63 0.62 -1.77 -2.93 -4.2 -1.45 -2.62 -1.51 1.85 -3.76 -3.19 -2.39 -2.8 1.19 -3.16 -1.65 -2.53 -2.32 1.57 2.83 0.27 -1.61 -2.14 0.02 -0.56 0.14
- - - - - - 0.56 - 0.65 2.73 - 0.66 1.07 - 2.67 - - 1.79 - - - - - - 0.74 - 1.64 - - 1.03
0.17 0.28 -0.29 0.39 0.56 0.58 -0.39 0.35 -0.26 0.06 -0.1 -0.32 0.27 -0.97 -0.93 -0.54 -0.19 0.66 -0.92 -0.53 -0.99 -0.05 -0.17 0.08 -0.26 -0.35 -0.69 0.34 0.3 1.1
-0.22 -7.89 -0.79 0.19 - -23.5 - - - 1.47 2.55 -0.69 - 0.26 0.02 1.46 0.96 -0.84 - - -1.52 - 0.86 -0.65 - 0.62 - 0.37 2.05 -0.11
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
- - - - - 2.46 2.15 - 3.48 - - - - - 3.15 - - - - - - - - - - - - - - -
1.21 1.33 -0.24 -2.05 0.63 0.39 -0.76 -1.39 -1.94 -1.09 -1.56 -0.4 1.76 -0.66 -1.67 -0.73 -2.43 1.57 -1.47 -1.34 -1.21 -0.99 1.03 1.47 -0.59 -0.76 -0.76 0.39 -1.61 -1.44
- - - - - - - - -14.67 - - - 4.91 - - - - - - - - - - - - - - - - -
-0.22 0.35 0.08 -1.69 0.3 0.24 -0.62 -0.75 -0.38 -0.03 -0.49 -0.49 -1.46 -3.39 -1.64 -0.74 -0.86 -2.57 -0.43 -1.04 -0.71 -0.33 2.09 1.86 0.04 0.0 -0.51 0.77 0.57 0.2
0.56 - - - 1.85 - -0.77 - 0.51 1.81 - 1.69 0.59 0.37 - 0.51 0.33 0.83 - - - - -0.74 - -0.62 1.99 - -0.3 1.13 -0.51
- - - - - - - - 3.37 3.31 - - - - - - 3.28 - - - - - - - - - - - - -
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
0.4 1.09 0.05 0.42 0.21 0.43 -1.28 0.17 -0.04 -0.12 -0.7 -0.16 -0.15 -1.23 -0.55 -0.22 -0.12 1.06 -1.22 -1.24 -0.63 -0.3 -0.98 -0.04 -0.15 -0.04 -0.8 0.26 0.75 0.8
-0.03 -0.22 -0.31 -0.05 0.09 0.32 0.09 0.08 -0.08 -0.14 0.17 0.17 0.38 -0.15 0.21 0.06 0.09 -0.24 -0.19 -0.08 -0.16 -0.22 0.22 -0.09 -0.03 0.05 0.09 -0.14 -0.15 -0.04
- - - - - - - 2.08 - - - - 4.42 - - - - - - - - - 2.12 - - - - - - -
-0.16 -0.13 -0.18 -0.21 -0.18 0.53 0.1 0.39 -0.0 -0.33 0.06 0.14 0.14 0.1 -0.34 -0.16 -0.36 -0.3 -0.38 0.13 -0.57 0.03 0.16 0.65 -0.37 -0.27 -0.49 0.33 0.27 0.39
0.65 0.35 -0.01 0.0 0.1 -0.3 -0.24 -0.2 0.02 0.19 0.07 0.24 -0.0 -0.41 -0.19 -0.66 -0.54 -0.78 -0.2 -0.29 -0.35 -0.28 0.76 0.57 0.12 -0.21 -0.26 0.34 0.65 -0.88
0.32 0.38 -0.79 -0.99 0.95 0.61 -0.91 -0.59 -1.01 -0.09 -0.69 -0.25 1.14 -1.92 -1.58 -1.34 -1.65 1.69 -1.08 -0.79 -0.67 -1.06 0.26 0.89 -0.3 -0.09 -0.75 0.15 -0.0 1.26
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
- - - - - - - - 3.15 - - - 4.4 - - - - - - - - - - - - - - - - -
0.42 0.89 -1.14 -0.8 0.99 0.04 -1.5 -1.52 -0.67 0.19 -1.63 -0.07 -0.57 -0.62 -3.69 -2.62 -2.59 1.43 -0.48 -0.36 -0.47 -0.71 1.99 0.93 0.35 0.28 -0.22 0.1 -0.91 -0.11
Spov3_S03.00020 (EXO84B)
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
- - - 1.15 - - - - - - - - 3.77 - - - 2.14 - - - - - - 2.86 - - - 1.3 - -
- 0.6 - - 0.53 - - 0.05 - - 1.57 - 3.48 1.04 - -0.99 1.05 0.93 - - - - - 1.56 - 0.5 - 0.01 - -
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
0.01 0.34 0.25 0.34 0.04 0.15 -0.11 0.22 -0.27 -0.33 -0.04 -0.09 -0.23 0.02 -0.09 0.16 0.02 0.62 -0.28 -0.35 -0.4 -0.22 -0.38 0.01 -0.37 -0.13 -0.26 0.3 0.14 0.24
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
0.5 0.85 0.49 -2.69 0.76 -0.65 -1.15 -1.27 0.23 -0.32 -1.93 -0.39 -0.29 0.32 -2.19 -3.56 -0.3 -0.04 -3.93 -3.79 -0.53 -0.53 2.2 1.32 0.57 0.57 0.13 0.39 -2.51 -0.49

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.