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  5. Spov3_chr3.00984

Spov3_chr3.00984


Description : not classified


Gene families : OG0000005 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.00984
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0012.00023 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0016.00037 RPB5D not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0066.00007 MAGL15 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0077.00012 HISN7, IMPL2 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01247 NHL2 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01546 GT2L, AtGT2L not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01671 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01700 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02192 AtABCB4, MDR4,... not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02316 RPB5D not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02518 GT2L, AtGT2L not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02597 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02602 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04519 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04768 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04924 CUL4, ATCUL4 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04954 RPB5D not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00381 MUS81, ATMUS81 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02252 PQT3 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02485 RPB5D not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01153 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02776 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03265 ATZW10, MIP1 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03971 RPB5D not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04381 OXS3, ATOXS3 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02138 GT2L, AtGT2L not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02140 RPB5D not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02403 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.03159 HISN7, IMPL2 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 251 369
No external refs found!