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  5. Spov3_chr3.00953

Spov3_chr3.00953 (CAP-D2)


Aliases : CAP-D2

Description : not classified


Gene families : OG0000128 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.00953
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Spov3_S02.00013 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.00764 SRO5 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.00765 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.01067 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04319 SUB1 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00954 NTP4 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01062 OXS3, ATOXS3 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00414 No alias not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01215 AtHMGB15, HMGBD15 not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02429 BRF3, MEE65 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02430 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.01452 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005743 mitochondrial inner membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006848 pyruvate transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015718 monocarboxylic acid transport IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019207 kinase regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0019866 organelle inner membrane IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019887 protein kinase regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901475 pyruvate transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1903825 organic acid transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1905039 carboxylic acid transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 11 122
No external refs found!