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  5. Spov3_chr3.00677

Spov3_chr3.00677


Description : not classified


Gene families : OG0000227 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.00677
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Spov3_S11.00022 SKI3, WAR1 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00392 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01669 No alias not classified 0.12 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03684 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.01737 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006749 glutathione metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006751 glutathione catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007275 multicellular organism development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015936 coenzyme A metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016842 amidine-lyase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032501 multicellular organismal process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025558 DUF4283 177 313
IPR026960 RVT-Znf 882 966
No external refs found!