Spov3_chr3.00470 (RAB18-1, ATRABC1,...)


Aliases : RAB18-1, ATRABC1, ATRAB18, RAB18, RABC1, ATRAB-C1

Description : C-class RAB GTPase


Gene families : OG0067234 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.00470
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_132


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003951 NAD+ kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004555 alpha,alpha-trehalase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0005984 disaccharide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0005991 trehalose metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006739 NADP metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006741 NADP biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006810 transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006812 monoatomic cation transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007034 vacuolar transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007275 multicellular organism development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008519 ammonium transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009311 oligosaccharide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009415 response to water IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0009916 alternative oxidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015399 primary active transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015927 trehalase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0016020 membrane IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016307 obsolete phosphatidylinositol phosphate kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016409 palmitoyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019362 pyridine nucleotide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019637 organophosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032501 multicellular organismal process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035091 phosphatidylinositol binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0040008 regulation of growth IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045927 positive regulation of growth IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048518 positive regulation of biological process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051179 localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072488 ammonium transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072524 pyridine-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0098660 inorganic ion transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0098662 inorganic cation transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901700 response to oxygen-containing compound IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1902074 response to salt IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 34 153
IPR001806 Small_GTPase 232 393
No external refs found!