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  5. Spov3_chr3.00392

Spov3_chr3.00392


Description : not classified


Gene families : OG0000227 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.00392
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Spov3_S11.00022 SKI3, WAR1 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00677 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01669 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02580 AtGulLO4, GulLO4 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006528 asparagine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006529 asparagine biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006810 transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006869 lipid transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008652 amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015850 organic hydroxy compound transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015918 sterol transport IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032365 intracellular lipid transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032366 intracellular sterol transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051179 localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901605 alpha-amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000477 RT_dom 519 773
IPR026960 RVT-Znf 950 1034
No external refs found!