Aliases : ERDL6, AtERDL6
Description : not classified
Gene families : OG0000113 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000113_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr2.05498 | |
Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_4 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Spov3_C0017.00006 | ERDL6, AtERDL6 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_S06.00020 | AIL6, PLT3 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr1.01890 | ERDL6, AtERDL6 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.03721 | ERDL6, AtERDL6 | not classified | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr3.00500 | No alias | not classified | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr3.01274 | PUB33 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr3.04310 | ERDL6, AtERDL6 | not classified | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr4.02387 | ERDL6, AtERDL6 | not classified | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr6.03003 | ERDL6, AtERDL6 | not classified | 0.12 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
MF | GO:0022857 | transmembrane transporter activity | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004518 | nuclease activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004519 | endonuclease activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004521 | RNA endonuclease activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004540 | RNA nuclease activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008270 | zinc ion binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016891 | RNA endonuclease activity, producing 5'-phosphomonoesters | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Spinacia oleracea GO terms from Neighborhoods |
CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Spinacia oleracea GO terms from Neighborhoods |
No external refs found! |