1. Home
  2. Species
  3. Spinacia oleracea
  4. Sequence
  5. Spov3_chr2.05390

Spov3_chr2.05390


Description : not classified


Gene families : OG0000356 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr2.05390
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0026.00003 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0035.00012 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03424 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03462 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00550 ATNPSN13, NPSN13 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02032 Phox3 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007010 cytoskeleton organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009262 deoxyribonucleotide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016843 amine-lyase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016844 strictosidine synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032392 DNA geometric change IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032508 DNA duplex unwinding IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR026960 RVT-Znf 828 903
IPR025558 DUF4283 219 361
No external refs found!