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  5. Spov3_chr2.05121

Spov3_chr2.05121


Description : not classified


Gene families : OG0000607 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr2.05121
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr2.00738 CRK8 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.01981 CYP96A2 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04026 ATM4, ATMYOS1, ATM2 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.05021 ATL95 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.00820 TCP19 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 525 575
IPR013103 RVT_2 945 1025
IPR029472 Copia-like_N 21 66
IPR001584 Integrase_cat-core 588 680
No external refs found!