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  5. Bra009630

Bra009630 (OPL1)


Aliases : OPL1

Description : not classified


Gene families : OG0012358 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra009630
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_182

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_9_36081.1 OPL2 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003774 cytoskeletal motor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003777 microtubule motor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003872 6-phosphofructokinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004017 adenylate kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004743 pyruvate kinase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005743 mitochondrial inner membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006090 pyruvate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006091 generation of precursor metabolites and energy IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006096 glycolytic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006284 base-excision repair IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007018 microtubule-based movement IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008443 phosphofructokinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019104 DNA N-glycosylase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019200 carbohydrate kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019205 nucleobase-containing compound kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0019866 organelle inner membrane IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030955 potassium ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031420 alkali metal ion binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032787 monocarboxylic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046855 obsolete inositol phosphate dephosphorylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050145 nucleoside monophosphate kinase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0061617 MICOS complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098798 mitochondrial protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098800 inner mitochondrial membrane protein complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR008004 OCTOPUS-like 202 278
IPR008004 OCTOPUS-like 1 195
No external refs found!