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Description : not classified
Gene families : OG0000023 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000023_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr2.04848 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_237 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_C0037.00012 | IEF | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0037.00016 | No alias | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0037.00027 | bHLH60 | not classified | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0037.00033 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0037.00034 | CBL1, ATCBL1, SCABP5 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0058.00009 | bHLH60 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0058.00015 | SWA1, EDA13, EDA19 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0058.00020 | CBL1, ATCBL1, SCABP5 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0101.00001 | CBL1, ATCBL1, SCABP5 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0170.00007 | No alias | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0171.00004 | CBL1, ATCBL1, SCABP5 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0345.00005 | ATIPT4, IPT4 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0398.00002 | No alias | not classified | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0530.00001 | bHLH60 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0536.00004 | CBL1, ATCBL1, SCABP5 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0625.00005 | SEC24A, ERMO2, AtSEC24A | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0684.00006 | bHLH60 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0701.00005 | bHLH60 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0713.00002 | AtVHP2;2, VHP2;2 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0840.00006 | CBL1, ATCBL1, SCABP5 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0898.00003 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0898.00004 | NPH4, MSG1,... | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0914.00003 | MAPKKK14 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0954.00001 | bHLH60 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0994.00001 | bHLH60 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1055.00005 | ATIPT4, IPT4 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1072.00004 | NPH4, MSG1,... | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1073.00002 | SEC24A, ERMO2, AtSEC24A | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1087.00004 | SEC24A, ERMO2, AtSEC24A | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1087.00005 | bHLH60 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1164.00004 | bHLH60 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1198.00001 | CBL1, ATCBL1, SCABP5 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1286.00001 | bHLH60 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1286.00002 | SEC24A, ERMO2, AtSEC24A | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1305.00004 | DOM1, EMB514 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1366.00001 | bHLH60 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1366.00002 | CBL1, ATCBL1, SCABP5 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1399.00001 | CBL1, ATCBL1, SCABP5 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1581.00001 | bHLH60 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1581.00002 | SEC24A, ERMO2, AtSEC24A | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1730.00001 | CBL1, ATCBL1, SCABP5 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_S09.00001 | bHLH60 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.02696 | bHLH60 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.03158 | NASP | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.03166 | bHLH60 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.03862 | CBL1, ATCBL1, SCABP5 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004649 | poly(ADP-ribose) glycohydrolase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006282 | regulation of DNA repair | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016043 | cellular component organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0030599 | pectinesterase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0035673 | oligopeptide transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0042545 | cell wall modification | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0042887 | amide transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071555 | cell wall organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0080134 | regulation of response to stress | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0080135 | regulation of cellular response to stress | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:1904680 | peptide transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |