Spov3_chr2.04634

Description : small subunit of TFIIa basal transcription factor complex

Gene families : OG0000818 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000818_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr2.04634
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_111

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005667	transcription regulator complex	None	Extended
CC	GO:0005672	transcription factor TFIIA complex	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006352	DNA-templated transcription initiation	None	Extended
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0090575	RNA polymerase II transcription regulator complex	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003735	structural constituent of ribosome	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004602	glutathione peroxidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005198	structural molecule activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005739	mitochondrion	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005743	mitochondrial inner membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005751	mitochondrial respiratory chain complex IV	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005840	ribosome	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006412	translation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006518	peptide metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006754	ATP biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006810	transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006811	monoatomic ion transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006812	monoatomic cation transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006813	potassium ion transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006848	pyruvate transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006850	mitochondrial pyruvate transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006897	endocytosis	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0008250	oligosaccharyltransferase complex	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009060	aerobic respiration	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009415	response to water	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009628	response to abiotic stimulus	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010035	response to inorganic substance	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015078	proton transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015711	organic anion transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015718	monocarboxylic acid transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015849	organic acid transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0016471	vacuolar proton-transporting V-type ATPase complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019646	aerobic electron transport chain	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0019866	organelle inner membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0022900	electron transport chain	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0022904	respiratory electron transport chain	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0031090	organelle membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0031966	mitochondrial membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0033176	proton-transporting V-type ATPase complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043043	peptide biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043228	non-membrane-bounded organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043603	amide metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043604	amide biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0045275	respiratory chain complex III	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0045277	respiratory chain complex IV	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045333	cellular respiration	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046034	ATP metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046942	carboxylic acid transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051179	localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051234	establishment of localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0055085	transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0070069	cytochrome complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071805	potassium ion transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0098657	import into cell	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0098796	membrane protein complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0098803	respiratory chain complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901475	pyruvate transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901700	response to oxygen-containing compound	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1901702	salt transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1902074	response to salt	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:1902495	transmembrane transporter complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1902600	proton transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1903825	organic acid transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:1904949	ATPase complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:1990204	oxidoreductase complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:1990351	transporter complex	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR015872	TFIIA_gsu_N	4	49
IPR015871	TFIIA_gsu_C	60	101

External Links

No external refs found!

Spov3_chr2.04634

Expression Profile

Co-expression Networks

Functional Annotation