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  5. Spov3_chr2.04425

Spov3_chr2.04425 (MTHSC70-2, HSC70-5)


Aliases : MTHSC70-2, HSC70-5

Description : not classified


Gene families : OG0000270 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000270_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr2.04425

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0056.00010 AtSAP130a, SAP130a not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0056.00011 PRL1 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02872 PPK1, AEL2, MLK4 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04949 CXE20, AtCXE20 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01171 ATU2AF65B, U2AF65b not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01172 AtSAP130a, SAP130a not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02499 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025452 DUF4218 533 635
IPR004242 Transposase_21 139 349
No external refs found!