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  5. Spov3_chr2.04026

Spov3_chr2.04026 (ATM4, ATMYOS1, ATM2)


Aliases : ATM4, ATMYOS1, ATM2

Description : not classified


Gene families : OG0000607 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr2.04026
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr2.01981 CYP96A2 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04025 NERD1 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.05121 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03607 OPL4 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.00820 TCP19 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005743 mitochondrial inner membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006848 pyruvate transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009143 nucleoside triphosphate catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015711 organic anion transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015718 monocarboxylic acid transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015849 organic acid transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0019866 organelle inner membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046434 organophosphate catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046942 carboxylic acid transport IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901292 nucleoside phosphate catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901475 pyruvate transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1903825 organic acid transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1905039 carboxylic acid transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!