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  5. Bra009521

Bra009521 (SBE2.2)


Aliases : SBE2.2

Description : starch branching enzyme. EC_2.4 glycosyltransferase


Gene families : OG0000404 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra009521
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_3


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005516 calmodulin binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005996 monosaccharide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006006 glucose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006094 gluconeogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006479 protein methylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006613 cotranslational protein targeting to membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006721 terpenoid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008213 protein alkylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008312 7S RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016114 terpenoid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016571 histone methylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016849 phosphorus-oxygen lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Brassica rapa GO terms from Neighborhoods
BP GO:0018022 peptidyl-lysine methylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0018024 obsolete histone lysine N-methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019318 hexose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019319 hexose biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019321 pentose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019566 arabinose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032977 membrane insertase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034968 histone lysine methylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046364 monosaccharide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046373 L-arabinose metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0048500 signal recognition particle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051668 localization within membrane IEP Brassica rapa GO terms from Neighborhoods
MF GO:0070402 NADPH binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Brassica rapa GO terms from Neighborhoods
MF GO:0071949 FAD binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140597 protein carrier chaperone IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 354 489
IPR004193 Glyco_hydro_13_N 191 274
IPR006048 A-amylase/branching_C 743 836
No external refs found!