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  5. Spov3_chr2.03798

Spov3_chr2.03798


Description : not classified


Gene families : OG0000246 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000246_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr2.03798
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Spov3_S12.00044 NFA2, NFA02, NAP1;2 not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02015 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02016 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.04502 ISTL5 not classified 0.12 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.01131 No alias not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.01132 SnRK3.2, CIPK2 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02484 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03861 ZRK13 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03862 No alias not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03866 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03867 TRM3, AtTRM3 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015936 coenzyme A metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025312 DUF4216 377 441
IPR025452 DUF4218 102 214
No external refs found!