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  5. Spov3_chr2.03582

Spov3_chr2.03582 (LOH3)


Aliases : LOH3

Description : not classified


Gene families : OG0001407 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001407_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr2.03582
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Spov3_S14.00013 LOH3 not classified 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.05361 LOH3 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03746 LOH3 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006528 asparagine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006529 asparagine biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 510 572
No external refs found!