Spov3_chr2.03170


Description : not classified


Gene families : OG0000023 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr2.03170
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0037.00017 WAV3 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0037.00034 CBL1, ATCBL1, SCABP5 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0101.00001 CBL1, ATCBL1, SCABP5 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0283.00002 SEC24A, ERMO2, AtSEC24A not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0491.00008 SEC24A, ERMO2, AtSEC24A not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0684.00006 bHLH60 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0701.00005 bHLH60 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0713.00002 AtVHP2;2, VHP2;2 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0857.00001 CBL1, ATCBL1, SCABP5 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0857.00002 No alias not classified 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0898.00004 NPH4, MSG1,... not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0928.00003 CBL1, ATCBL1, SCABP5 not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0947.00003 CBL1, ATCBL1, SCABP5 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0994.00001 bHLH60 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1087.00004 SEC24A, ERMO2, AtSEC24A not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1087.00005 bHLH60 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1125.00002 CHS4, LSD1 not classified 0.14 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1286.00001 bHLH60 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1286.00002 SEC24A, ERMO2, AtSEC24A not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1366.00001 bHLH60 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1366.00002 CBL1, ATCBL1, SCABP5 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1399.00001 CBL1, ATCBL1, SCABP5 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1485.00001 CBL1, ATCBL1, SCABP5 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1730.00001 CBL1, ATCBL1, SCABP5 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S09.00001 bHLH60 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S09.00002 CHS4, LSD1 not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02696 bHLH60 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02061 No alias not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence

ip_dynamic_tooltip" qtip_href="/sequence/tooltip/82448">Spov3_C0037.00017
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006412 translation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
WAV3 not classified 0.03