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  5. Spov3_chr2.03044

Spov3_chr2.03044 (CLE40)


Aliases : CLE40

Description : not classified


Gene families : OG0000446 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr2.03044
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr1.04792 C53 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03835 GGL22 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.05204 CESA9, CESA09 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03152 GGL22 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02245 GGL22 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.03521 CESA9, CESA09 not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043484 regulation of RNA splicing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0050684 regulation of mRNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1903311 regulation of mRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR010666 Znf_GRF 26 65
No external refs found!