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  5. Spov3_chr2.02843

Spov3_chr2.02843 (ATMYA1, MYA1, XI-1)


Aliases : ATMYA1, MYA1, XI-1

Description : not classified


Gene families : OG0000847 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000847_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr2.02843
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr1.00674 AGC1.7 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02844 CPK33 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004540 RNA nuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006974 DNA damage response IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000477 RT_dom 445 495
No external refs found!