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  5. Bra009411

Bra009411 (VPS36)


Aliases : VPS36

Description : component *(VPS36) of ESCRT-II complex


Gene families : OG0007298 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra009411
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_200


Type GO Term Name Evidence Source
MF GO:0032266 phosphatidylinositol-3-phosphate binding IEA Interproscan
MF GO:0043130 ubiquitin binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0000155 phosphorelay sensor kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000160 phosphorelay signal transduction system IEP Brassica rapa GO terms from Neighborhoods
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004177 aminopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004673 protein histidine kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004842 ubiquitin-protein transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005347 ATP transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005471 ATP:ADP antiporter activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005643 nuclear pore IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006862 nucleotide transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008514 organic anion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015215 nucleotide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015217 ADP transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015748 organophosphate ester transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016197 endosomal transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016482 cytosolic transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016567 protein ubiquitination IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016755 aminoacyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017056 structural constituent of nuclear pore IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019786 protein-phosphatidylethanolamide deconjugating activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030906 retromer, cargo-selective complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032446 protein modification by small protein conjugation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0035556 intracellular signal transduction IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042147 retrograde transport, endosome to Golgi IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061659 ubiquitin-like protein ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061666 UFM1 ligase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Brassica rapa GO terms from Neighborhoods
MF GO:0071568 UFM1 transferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071569 protein ufmylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140299 small molecule sensor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR021648 GLUE_dom 17 111
IPR040608 Snf8/Vps36 175 399
No external refs found!