Spov3_chr2.02396

Description : not classified

Gene families : OG0000220 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr2.02396
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
Spov3_C0002.00013	RECQSIM	not classified	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0002.00014	NAD3	not classified	0.06	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.00931	No alias	not classified	0.1	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01739	HCS1	not classified	0.12	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.01892	No alias	not classified	0.08	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01537	BRP1	not classified	0.06	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00921	WRKY27, ATWRKY27	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02917	EXPRS	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.01255	No alias	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0010181	FMN binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0070001	aspartic-type peptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003653	Peptidase_C48_C	990	1171

External Links

No external refs found!