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  5. Spov3_chr2.01845

Spov3_chr2.01845 (CNGC16, ATCNGC16)


Aliases : CNGC16, ATCNGC16

Description : cyclic nucleotide-gated cation channel *(CNGC)


Gene families : OG0062714 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr2.01845
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_3


Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007034 vacuolar transport IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 49 373
IPR000595 cNMP-bd_dom 471 560
No external refs found!