Bra009293 (SnRK3.2, CIPK2)

Aliases : SnRK3.2, CIPK2

Description : EC_2.7 transferase transferring phosphorus-containing group. CBL-dependent protein kinase *(CIPK). SnRK3 SNF1-related protein kinase

Gene families : OG0002884 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002884_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra009293
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_221

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003997	acyl-CoA oxidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004096	catalase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005777	peroxisome	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006413	translational initiation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006479	protein methylation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006635	fatty acid beta-oxidation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008213	protein alkylation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009062	fatty acid catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016042	lipid catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016054	organic acid catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016570	histone modification	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016571	histone methylation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0018022	peptidyl-lysine methylation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0018024	obsolete histone lysine N-methyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0018205	peptidyl-lysine modification	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019395	fatty acid oxidation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0030258	lipid modification	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0032259	methylation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034440	lipid oxidation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034968	histone lysine methylation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0042579	microbody	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0042887	amide transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043414	macromolecule methylation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044242	cellular lipid catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044248	cellular catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044282	small molecule catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046395	carboxylic acid catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	12	266
IPR004041	NAF_dom	316	372

External Links

No external refs found!

Bra009293 (SnRK3.2, CIPK2)

Expression Profile

Co-expression Networks

Functional Annotation