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  5. Spov3_chr2.00860

Spov3_chr2.00860 (RH8, ATRH8)


Aliases : RH8, ATRH8

Description : DDX6-type mRNA helicase *(RH12/RH8)


Gene families : OG0000443 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr2.00860
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_89


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004721 phosphoprotein phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004725 protein tyrosine phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005783 endoplasmic reticulum IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006470 protein dephosphorylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006873 intracellular monoatomic ion homeostasis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006874 intracellular calcium ion homeostasis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009719 response to endogenous stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010033 response to organic substance IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016311 dephosphorylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019725 cellular homeostasis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0030003 intracellular monoatomic cation homeostasis IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030014 CCR4-NOT complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032469 endoplasmic reticulum calcium ion homeostasis IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042221 response to chemical IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042592 homeostatic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048878 chemical homeostasis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0050801 monoatomic ion homeostasis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0055074 calcium ion homeostasis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0055080 monoatomic cation homeostasis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0055082 intracellular chemical homeostasis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0098771 inorganic ion homeostasis IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 160 324
IPR001650 Helicase_C 360 467
No external refs found!