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Aliases : ATUBA2, UBA 2
Description : E1 ubiquitin-activating enzyme
Gene families : OG0012411 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra009196 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_252 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_chr2.04071 | MOS5, ATUBA1, UBA1 | E1 ubiquitin-activating enzyme | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003712 | transcription coregulator activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005634 | nucleus | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005667 | transcription regulator complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006265 | DNA topological change | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0016592 | mediator complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0017053 | transcription repressor complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0031267 | small GTPase binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042254 | ribosome biogenesis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044085 | cellular component biogenesis | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051020 | GTPase binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051276 | chromosome organization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071103 | DNA conformation change | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140299 | small molecule sensor activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140612 | DNA damage sensor activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140664 | ATP-dependent DNA damage sensor activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
| No external refs found! |