Spov3_chr1.04835 (CSY2)

Aliases : CSY2

Description : citrate synthase

Gene families : OG0009565 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr1.04835
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_151

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_8_31881.1	CSY2	citrate synthase	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006099	tricarboxylic acid cycle	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0000139	Golgi membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0000166	nucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003997	acyl-CoA oxidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004484	mRNA guanylyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005524	ATP binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005777	peroxisome	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006082	organic acid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006370	7-methylguanosine mRNA capping	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006397	mRNA processing	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006631	fatty acid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006635	fatty acid beta-oxidation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006766	vitamin metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006771	riboflavin metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006810	transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006826	iron ion transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006906	vesicle fusion	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007030	Golgi organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008104	protein localization	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008192	RNA guanylyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009056	catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009062	fatty acid catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009110	vitamin biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009231	riboflavin biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009452	7-methylguanosine RNA capping	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009987	cellular process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015031	protein transport	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016042	lipid catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016050	vesicle organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016054	organic acid catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016192	vesicle-mediated transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016197	endosomal transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016311	dephosphorylation	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016462	pyrophosphatase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016482	cytosolic transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016830	carbon-carbon lyase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016887	ATP hydrolysis activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0017076	purine nucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019395	fatty acid oxidation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019752	carboxylic acid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0030258	lipid modification	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0030554	adenyl nucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0030906	retromer, cargo-selective complex	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0032553	ribonucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0032555	purine ribonucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033036	macromolecule localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034440	lipid oxidation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034755	iron ion transmembrane transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0036094	small molecule binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0036260	RNA capping	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0042579	microbody	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0042726	flavin-containing compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0043168	anion binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043436	oxoacid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044242	cellular lipid catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044248	cellular catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044281	small molecule metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044282	small molecule catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045184	establishment of protein localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046395	carboxylic acid catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046907	intracellular transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048280	vesicle fusion with Golgi apparatus	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048284	organelle fusion	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051179	localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051234	establishment of localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051641	cellular localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051649	establishment of localization in cell	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0061024	membrane organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0061025	membrane fusion	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0070568	guanylyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0070727	cellular macromolecule localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071702	organic substance transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071705	nitrogen compound transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0090174	organelle membrane fusion	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0097367	carbohydrate derivative binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1901265	nucleoside phosphate binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901575	organic substance catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002020	Citrate_synthase	98	466

External Links

No external refs found!

Spov3_chr1.04835 (CSY2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation