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  5. Spov3_chr1.04795

Spov3_chr1.04795 (ATU2AF35B, U2AF35B)


Aliases : ATU2AF35B, U2AF35B

Description : small subunit of U2AF pre-RNA splicing auxiliary factor complex


Gene families : OG0068791 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.04795
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_30


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004652 obsolete polynucleotide adenylyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005667 transcription regulator complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005669 transcription factor TFIID complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006298 mismatch repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006352 DNA-templated transcription initiation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006479 protein methylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008213 protein alkylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016571 histone methylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018022 peptidyl-lysine methylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0018024 obsolete histone lysine N-methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018205 peptidyl-lysine modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031047 regulatory ncRNA-mediated gene silencing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031179 peptide modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032259 methylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034968 histone lysine methylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043414 macromolecule methylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043631 obsolete RNA polyadenylation IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 14 37
IPR000571 Znf_CCCH 150 173
IPR000504 RRM_dom 83 139
No external refs found!