Spov3_chr1.04487

Description : metal-citrate complex transporter *(FRD)

Gene families : OG0000301 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr1.04487
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_225

Target	Alias	Description	ECC score	Gene Family Method
Spov3_C0076.00001	No alias	metal-citrate complex transporter *(FRD)	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01802	No alias	metal-citrate complex transporter *(FRD)	0.08	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.05417	No alias	metal-citrate complex transporter *(FRD)	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01344	No alias	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02574	No alias	metal-citrate complex transporter *(FRD)	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02015	No alias	metal-citrate complex transporter *(FRD)	0.09	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015291	secondary active transmembrane transporter activity	None	Extended
MF	GO:0015297	antiporter activity	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000278	mitotic cell cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0000775	chromosome, centromeric region	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007049	cell cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009308	amine metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009690	cytokinin metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010817	regulation of hormone levels	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0042445	hormone metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0065008	regulation of biological quality	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0098687	chromosomal region	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002528	MATE_fam	7	173

External Links

No external refs found!