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  5. Spov3_chr1.04145

Spov3_chr1.04145 (RAB5A, RABF2A,...)


Aliases : RAB5A, RABF2A, ATRAB-F2A, ATRABF2A, RAB-F2A, RHA1, ATRAB5A

Description : not classified


Gene families : OG0000470 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000470_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.04145
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_139

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_8_142400.1 ATRAB11B,... A-class RAB GTPase 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004807 triose-phosphate isomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006613 cotranslational protein targeting to membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008312 7S RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016860 intramolecular oxidoreductase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032977 membrane insertase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033365 protein localization to organelle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0048500 signal recognition particle IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051668 localization within membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072594 establishment of protein localization to organelle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140597 protein carrier chaperone IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001806 Small_GTPase 12 171
No external refs found!