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  5. Spov3_chr1.03619

Spov3_chr1.03619 (BGLU41)


Aliases : BGLU41

Description : not classified


Gene families : OG0001387 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001387_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.03619
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr2.01073 PED3, CTS,... not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.03461 B120 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004190 aspartic-type endopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070001 aspartic-type peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 115 193
IPR025724 GAG-pre-integrase_dom 513 564
IPR013103 RVT_2 792 903
IPR029472 Copia-like_N 29 76
No external refs found!