Description : FRS/FRF-type transcription factor
Gene families : OG0000062 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000062_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr1.03498 | |
Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_121 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Spov3_chr1.00757 | No alias | FRS/FRF-type transcription factor | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.03248 | No alias | FRS/FRF-type transcription factor | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.03584 | No alias | FRS/FRF-type transcription factor | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.03646 | PBL16 | FRS/FRF-type transcription factor | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.03647 | No alias | FRS/FRF-type transcription factor | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr2.04717 | AtTRM5c, TRM5c | FRS/FRF-type transcription factor | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr3.02678 | PUB53 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr4.01814 | FRS5 | FRS/FRF-type transcription factor | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr4.02273 | WRKY21 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr4.02275 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr4.02276 | No alias | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr4.02370 | PDE331 | FRS/FRF-type transcription factor | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr4.02371 | No alias | FRS/FRF-type transcription factor | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr5.03913 | No alias | FRS/FRF-type transcription factor | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr5.04324 | No alias | FRS/FRF-type transcription factor | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr5.04365 | No alias | FRS/FRF-type transcription factor | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr6.02554 | No alias | FRS/FRF-type transcription factor | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003937 | IMP cyclohydrolase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004643 | phosphoribosylaminoimidazolecarboxamide formyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0009117 | nucleotide metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016787 | hydrolase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0019238 | cyclohydrolase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0019637 | organophosphate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
No external refs found! |