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  5. Spov3_chr1.03184

Spov3_chr1.03184 (TARANI, TTN6, PER1,...)


Aliases : TARANI, TTN6, PER1, DA3, ATUBP14, TNI, UBP14

Description : not classified


Gene families : OG0000090 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.03184
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_851

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0009.00059 TARANI, TTN6,... not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03579 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04123 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.01593 ECH component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008236 serine-type peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017171 serine hydrolase activity IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR013103 RVT_2 125 242
IPR001567 Pept_M3A_M3B_dom 316 396
No external refs found!