Spov3_chr1.03082

Description : not classified

Gene families : OG0003723 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003723_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr1.03082
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_94

Target	Alias	Description	ECC score	Gene Family Method	Actions
Spov3_chr2.03368	bZIP23, AtbZIP23	zinc cation sensor protein *(bZIP19/bZIP23)). bZIP...	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	RNA endonuclease activity	None	Extended
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEA	Interproscan
MF	GO:0004540	RNA nuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016891	RNA endonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004527	exonuclease activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006417	regulation of translation	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008408	3'-5' exonuclease activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0010333	terpene synthase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0017148	negative regulation of translation	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0030597	RNA glycosylase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0030598	rRNA N-glycosylase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034248	regulation of amide metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034249	negative regulation of amide metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048364	root development	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048367	shoot system development	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048731	system development	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051248	negative regulation of protein metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0099402	plant organ development	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002156	RNaseH_domain	789	910
IPR000477	RT_dom	242	389

External Links

No external refs found!

Spov3_chr1.03082

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation