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  5. Spov3_chr1.02795

Spov3_chr1.02795 (VPS9, ATVPS9A, VPS9A)


Aliases : VPS9, ATVPS9A, VPS9A

Description : not classified


Gene families : OG0001378 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.02795
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0001.00202 VPS9, ATVPS9A, VPS9A not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.00897 VPS9, ATVPS9A, VPS9A not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02895 VPS9, ATVPS9A, VPS9A not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
BP GO:0006952 defense response IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004326 Mlo 20 65
No external refs found!