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  5. Spov3_chr1.02675

Spov3_chr1.02675 (ACL5)


Aliases : ACL5

Description : not classified


Gene families : OG0000053 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000053_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.02675
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0001.00105 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0410.00001 CRK33 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0410.00003 TRIP13, PCH2 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S02.00049 AtVHP1;1,... not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01612 No alias component *(SCD2)of post-Golgi trafficking SCD complex 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02182 CRK33 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02761 NUP82 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02762 CRK33 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.04911 ACL5 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02901 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03497 DJA7 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04926 CRK33 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04927 ACL5 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.05109 WAK3 not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.05228 CRK33 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.05480 ACL5 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00684 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02640 CRK33 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03305 CRK33 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03337 CRK33 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02280 CRK33 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02530 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02531 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02304 NUP82 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03582 CRK33 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03828 CRK33 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04134 CRK33 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04152 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04153 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04154 MCP1c, AtMCP1c,... not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02162 CRK33 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02839 CRK33 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004650 polygalacturonase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005743 mitochondrial inner membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006848 pyruvate transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007165 signal transduction IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009143 nucleoside triphosphate catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015718 monocarboxylic acid transport IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0019866 organelle inner membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0035556 intracellular signal transduction IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046434 organophosphate catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901292 nucleoside phosphate catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901475 pyruvate transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1903825 organic acid transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1905039 carboxylic acid transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!