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  5. Spov3_chr1.02642

Spov3_chr1.02642 (ATSBT3.3, SBT3.3)


Aliases : ATSBT3.3, SBT3.3

Description : not classified


Gene families : OG0000017 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr1.02642
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr1.03515 APE2, TPT not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00687 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003993 acid phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006720 isoprenoid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006721 terpenoid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016114 terpenoid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016744 transketolase or transaldolase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016791 phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0042578 phosphoric ester hydrolase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140101 catalytic activity, acting on a tRNA IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!